IGVFFI1740RETT

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3628MXUK(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G1_P060_L005_R2

md5sum

4f99d174c68cfd5ad20fe84d28ceb6f2

Content MD5sum

17d83ca14577c72f0b89dafd43d45015

File Size

1.9 GB

Submitted File Name

Multiome_RNA_RP011_G1_L009_P060_S25_L005_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

43883513

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4137SEKT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples