IGVFFI1739LADC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9442NJMF(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X012_G7_P012_L004_R1

md5sum

dddfcb7656af9a204186a765b3e4a00c

Content MD5sum

50aaa1e363aff751626c4e04cb41b7be

File Size

4.4 GB

Submitted File Name

Multiome_RNA_X012_G7_L007_P012_S17_L004_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HJ7TNDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

207087306

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM3364ZVVD

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue; Homo sapiens (male, 72 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples