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IGVFFI1735LABN
IGVFFI1735LABN
released
validated
Json view
File Set
IGVFDS1243NBLH
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P016-R1
md5sum
432754cc4a98cd6cac65cf1776acddef
Content MD5sum
37d62beec478bef009b9f2065bb64508
File Size
7.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool16.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
49478441
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5206MZCI
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.6 GB
validated
IGVFFI5820VTXJ
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.9 GB
validated