Home

IGVFFI1732SLOD

released
validated
File Set
IGVFDS9896MQFE(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS17-18-prim-2-ATAC.R1.fastq.gz
md5sum
52ecceb8bda63d089c4f20026d8846e8
Content MD5sum
8d53c33932ef267fe73fd564bd377c28
File Size
9.4 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS17-18-prim-2-ATAC.R1.fastq.gz
Checkfiles Version
v14
Submitter Comment
DSS17-18-prim-22k-1_P1.09,DSS17-18-prim-22k-2_P1.10
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
90.25
Read Count
177181258

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Mus musculus C57BL/6J colon cell

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
4.9 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI9017EKJQ, IGVFFI1732SLOD, IGVFFI9072DUME
Jason Buenrostro, Broad
1.2 KB
validated