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INDEXED
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SequenceFile
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IGVFFI1728ECQN
IGVFFI1728ECQN
released
validated
Json view
File Set
IGVFDS9728TWXO
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 263
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2102_R2
bradley-bernstein:SS-LS_263_R2
buenrostro-bernstein:SS-LS_2102_R2
buenrostro-bernstein:SS-LS_263_R2
md5sum
27f785017aa806f46b4842d28368f426
Content MD5sum
f9c1e3b740d7f7af604889466f74a6f5
File Size
362 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-184_L2_SS-PKR-132_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
263
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
7039003
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8883WYCA
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 132)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8780JHZV
yaml
seqspec
seqspec of IGVFFI4498HQPP, IGVFFI1728ECQN
Jason Buenrostro, Broad
1.2 KB
validated