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INDEXED
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SequenceFile
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IGVFFI1687BNXU
IGVFFI1687BNXU
released
validated
Json view
File Set
IGVFDS2552IDIF
(snMCT-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snmct_C39_day0_L3_R2
md5sum
4cc397bd3b3c91feae63de1b769b77c6
Content MD5sum
0b294e63aeeb64aee51e810ecf33f21a
File Size
4.6 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snmct/yzcl51/20231204-C39D0-Pos1-A10_S10_L003_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
148.11
Read Count
60680931
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8158AYJT
InVitroSystem
fibroblast
fibroblast cell line, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA