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INDEXED
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SequenceFile
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IGVFFI1679NQTL
IGVFFI1679NQTL
released
validated
Json view
File Set
IGVFDS7371DIJR
(snM3C-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C37_day5_L4_R2
md5sum
ab9782ab81f0cccc1bb6d116cd88049e
Content MD5sum
c2aa590a5d2b3fb75153f150ca31092e
File Size
3.6 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C37D5-Pos1-C10_S31_L004_R2_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
2
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
149.1
Read Count
49937157
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7707VNNA
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 5 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA