IGVFFI1678DNCV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5672IBLK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X042_G5_P044_L007_I2

md5sum

636a3699fd1dbf3d5eba064eef22ae97

Content MD5sum

5a92fd744a7902b8b88cba2e00e4ac0f

File Size

337 MB

Submitted File Name

Multiome_RNA_X042_G5_L005_P044_S23_L007_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

222YMLLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

62331667

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1132ELYG

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples