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SequenceFile
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IGVFFI1673PPKS
IGVFFI1673PPKS
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS9014MGZR
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP023_G2_P068_L001_R1
md5sum
32e4a55ab4e425e7da3a12e453c3eb4c
Content MD5sum
9f5b6c4fe1b5b25aed52679b29eb6bd3
File Size
1.7 GB
Submitted File Name
Multiome_RNA_RP023_G2_L002_P068_S14_L001_R1_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
2257GYLT3
Lane
1
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
28
Read Count
84465712
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM7198XDQQ
MultiplexedSample
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
cerebral amyloid angiopathy
,
mild cognitive impairment
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 52 years) posterior cingulate gyrus tissue; Homo sapiens (male, 87 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples