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SequenceFile
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IGVFFI1673PBBK
IGVFFI1673PBBK
released
validated
Json view
File Set
IGVFDS5473KODL
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9049
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9049_R1
md5sum
6f421e3f15ad180d4da278afb01e4436
Content MD5sum
9a67fb12a4ae159d8c4dfbda4813353b
File Size
1.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2303_L7_SS-PKR-180_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9049
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
38624514
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7279BVJC
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5661JMLK
yaml
seqspec
seqspec of IGVFFI1673PBBK, IGVFFI3066XTCU, IGVFFI9699QUCC
Jason Buenrostro, Broad
1.3 KB
validated