IGVFFI1670ZCMV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5365DMUS(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP026_G7_P076_L006_R1

md5sum

f28f710e5f806650b4ddb82a6392e2c2

Content MD5sum

b30949338ca27a61ce78847ecc196be8

File Size

16 GB

Submitted File Name

Multiome_RNA_RP026_G7_L007_P076_S47_L006_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

171797125

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6899HSQU

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 6 more samples