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IGVFFI1661TZNI

released
validated
File Set
IGVFDS1601YMKN(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1490
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1490_R1
buenrostro-bernstein:SS-LS_1490_R1
md5sum
b8350095a3030252b60fcdc44a4fb449
Content MD5sum
d703ed0f79bf9cea301e963898f332fd
File Size
615 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1083_L2_SS-PKR-2_SS-V2-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1490
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
29617159

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
Homo sapiens (male, 49 years) bone marrow cell (cellular sub pool: SS-PKR 2)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated