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IGVFFI1654DSPU

released
validated
File Set
IGVFDS8460SRNI(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 1492
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1492_R1
buenrostro-bernstein:SS-LS_1492_R1
md5sum
4498a66d4bc3e0c6a012ca7c3d23e56d
Content MD5sum
a92f53a8d337050899511ac4f82c0c61
File Size
556 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1085_L2_SS-PKR-2_SS-V2-PLATE2-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1492
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
26510006

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad