IGVFFI1644URGX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0609EETP(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X035_G6_P036_L004_I1

md5sum

f735f6ca67156b5f7d366768d414f43b

Content MD5sum

4175b5a6cf0e22b78899f42efefa68f6

File Size

1.1 GB

Submitted File Name

Multiome_RNA_X035_G6_L006_P036_S52_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H2WFTDSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

160386195

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5298RMGT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) substantia nigra tissue; Homo sapiens (female, 84 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples