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INDEXED
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SequenceFile
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IGVFFI1639LVRI
IGVFFI1639LVRI
released
validated
Json view
File Set
IGVFDS9953SGYZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8839
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8839_R1
md5sum
beb52b63dac5939dd956df3f166b31b9
Content MD5sum
e5bdc039215300dd0d5bcc5bc40ac9dc
File Size
2.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2285_L5_SS-PKR-177_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8839
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
49564774
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1399KNRB
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 177)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2949DQPW
yaml
seqspec
seqspec of IGVFFI1639LVRI, IGVFFI7575DEEM, IGVFFI3774EAPN
Jason Buenrostro, Broad
1.3 KB
validated