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IGVFFI1626YGTP

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7972QGPM(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 287
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX2-SC2_snATAC_S3_R1
md5sum
da5ac7f886c5f5ddbb8b59ee1b2ab5f9
Content MD5sum
7e9efadd7e0ab7698d9c5bd021a17848
File Size
5.4 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX2-SC2/BHM2VLDSX2/XHLT1-POOL-XX2-SC2-ATAC_S6_L003_R1_001.fastq.gz
Checkfiles Version
v17

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
287
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
173139624

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female, 27.0 years) peripheral blood mononuclear cell; Homo sapiens (male, 54.0 years) peripheral blood mononuclear cell; ... and 17 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Jimmie Ye, UCSF