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INDEXED
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SequenceFile
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IGVFFI1623XDWA
IGVFFI1623XDWA
released
validated
Json view
File Set
IGVFDS6752GRBU
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C29_day14_L8_R1
md5sum
912a512ac9c3515fb1ecb0364c2e3a61
Content MD5sum
857ae688bd4e420961a7baa5530d06df
File Size
2.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl48/20231016-3C29D14-Pos1-B01_S12_L008_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
8
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
146.57
Read Count
42640563
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9932FZKJ
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 14 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA