IGVFFI1621XVYV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6915EFKE(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G4_P062_L008_I1

md5sum

b21f84108d0ee39da02e70c45471b5d0

Content MD5sum

bb583cef347d13b7ca87b466c1e60b16

File Size

425 MB

Submitted File Name

Multiome_RNA_RP013_G4_L004_P062_S24_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

69326527

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1576QCMO

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples