Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1620FHAB
IGVFFI1620FHAB
released
validated
Json view
File Set
IGVFDS7938OXSK
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 7380
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7380_R1
md5sum
fa2f2be1546bfb6324296acf9c1ab7bf
Content MD5sum
485dd829a24a7cba85477cedc7fb0dc2
File Size
8.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1916_L8_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7380
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
184758313
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0432LITC
yaml
seqspec
seqspec of IGVFFI1620FHAB, IGVFFI9110GXHY
Jason Buenrostro, Broad
1.3 KB
validated