IGVFFI1613FPCH

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6851DOUV(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X014_G3_P014_L002_R2

md5sum

846514d3b8d49320556d538433890412

Content MD5sum

aaea143ef0882b90d479dce36db193d4

File Size

11 GB

Submitted File Name

Multiome_RNA_X014_G3_L003_P014_S15_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

263484724

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4095XUWZ

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 89 years) cerebellar cortex tissue; Homo sapiens (male, 80 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples