Home

IGVFFI1611BHRS

released
validated
File Set
IGVFDS9726WUJT(Parse SPLiT-seq)
Summary
R2 reads from sequencing run 2
File Format
fastq
Content Type
reads
md5sum
c922a5e4f6142ca52d342ed9d6ed5a5d
Content MD5sum
846e8bd832090c1c44d942fc52e3b45a
File Size
6.9 GB
Submitted File Name
igvf_011/nova1/igvf_011_B06_D_nova_N1_L002_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2
Flowcell ID
HCGMMDSX7
Lane
2
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
86
Read Count
195349003

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.4 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI1611BHRS, IGVFFI4631OLIO
Ali Mortazavi, UCI
1.4 KB
validated