IGVFFI1606VGJB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9748IKAS(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP010_G2_P058_L002_I2

md5sum

8c6a479668ccaadb9fb844e27bea0865

Content MD5sum

4634f1acc0f3408f9dcc58778e9b5b63

File Size

491 MB

Submitted File Name

Multiome_RNA_RP010_G2_L002_P058_S41_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

82908321

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8981GXZB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) putamen tissue associated with Parkinson's disease, mild cognitive impairment; ... and 12 more samples