Home

IGVFFI1605OPQV

released
validated
File Set
IGVFDS8460SRNI(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2354
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2354_R1
buenrostro-bernstein:SS-LS_2354_R1
md5sum
5213d8e5e20b68e283320fad55191ae8
Content MD5sum
29fc7e91b871d4435ca31dd177e3e090
File Size
307 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-22_L2_SS-PKR-2_SS-V2-PLATE2-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2354
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
15286813

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad