IGVFFI1603HYIU

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3628MXUK(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP011_G1_P060_L006_R1

md5sum

a8a036ac7fef4ac3c502eede9e4079e1

Content MD5sum

fd6fed74ec4749f32bf439984c1a4e0d

File Size

880 MB

Submitted File Name

Multiome_RNA_RP011_G1_L009_P060_S25_L006_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

43593652

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4137SEKT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 53 years) middle temporal gyrus tissue; Homo sapiens (male, 75 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 14 more samples