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INDEXED
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SequenceFile
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IGVFFI1600LXKL
IGVFFI1600LXKL
released
validated
Json view
File Set
IGVFDS4624JCMI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8316
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8316_R1
md5sum
7312fbd93f10c210d70e313071483923
Content MD5sum
c48e57e18f34eb3dc94267d7598b8d73
File Size
3.7 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2162_L1_SS-PKR-576_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8316
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
88310937
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7633DIYU
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 576)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7790ETRV
yaml
seqspec
seqspec of IGVFFI1600LXKL, IGVFFI2986ERTL
Jason Buenrostro, Broad
1.3 KB
validated