IGVFFI1591LBRZ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8219ZWGY(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X042_G2_P044_L005_R1

md5sum

91f9171f1aaee3bb47074589c8b20a5e

Content MD5sum

eeb9eb2509894e0f0f4d2c4ff69c8403

File Size

1.3 GB

Submitted File Name

Multiome_RNA_X042_G2_L002_P044_S20_L005_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

222YMLLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

66066721

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9775XYEX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 82 years) putamen tissue associated with Alzheimer disease, Parkinson's disease, cerebral amyloid angiopathy, multiple sclerosis; ... and 10 more samples