Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1588UTCX
IGVFFI1588UTCX
released
validated
Json view
File Set
IGVFDS1847PMGO
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2451
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2451_R2
buenrostro-bernstein:SS-LS_2451_R2
md5sum
0b856bdb1fd528477b6c36a38d732bc0
Content MD5sum
e93ba872b78541d747e9bd063c49d173
File Size
782 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-23_L3_SS-PKR-2_SS-V2-PLATE2-3rd-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2451
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
17349261
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9496THJI
PrimaryCell
bone marrow
Homo sapiens (male, 37 years) bone marrow cell (cellular sub pool: SS-PKR 2)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated