IGVFFI1564IYKC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8061INAG(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G3_P054_L005_I2

md5sum

f78bbd5f3f9407699562a4d64d021254

Content MD5sum

a8038982f8ed1485bb405294a45e3fba

File Size

244 MB

Submitted File Name

Multiome_RNA_RP005_G3_L003_P054_S38_L005_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

40098599

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0891NGTB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples