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SequenceFile
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IGVFFI1557OPUV
IGVFFI1557OPUV
released
validated
Json view
File Set
IGVFDS4165XBTP
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8749
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8749_R1
md5sum
1346b5eab9a981663cd3e2f3052612a6
Content MD5sum
2876648c65e74b34d6a0a38a3ebe127a
File Size
24 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2291_L4_SS-PKR-178_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8749
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
518197
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6714ZQAO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 178)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5590JJBL
yaml
seqspec
seqspec of IGVFFI1557OPUV, IGVFFI3371QUJF, IGVFFI4021XQTL
Jason Buenrostro, Broad
1.3 KB
validated