IGVFFI1548KWMB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0571RKTK(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP001_G3_P052_L004_I1

md5sum

7afefce4f70cb625df8f6897854697b7

Content MD5sum

410a5519ec52fa0afd8607492e7d6027

File Size

230 MB

Submitted File Name

Multiome_RNA_RP001_G3_L003_P052_S3_L004_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

33758594

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8767PGTT

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 79 years) posterior cingulate gyrus tissue; Homo sapiens (male, 81 years) putamen tissue; ... and 10 more samples