Home
Home
Search (⌘K or ⌃K)
Data
Resources / Standards
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1520LSOA
IGVFFI1520LSOA
released
validated
Json view
File Set
IGVFDS5081XXKG
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8852
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8852_R1
md5sum
655750d5f7600baa6c1169efd26a555b
Content MD5sum
97a33648c17a28ab874b1a0ec2c4f581
File Size
686 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2298_L5_SS-PKR-179_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8852
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15355482
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6528GBQO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 179)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5845GSZL
yaml
seqspec
seqspec of IGVFFI1520LSOA, IGVFFI2387XDFP, IGVFFI1072HNPQ
Jason Buenrostro, Broad
1.3 KB
validated