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INDEXED
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SequenceFile
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IGVFFI1517VBJH
IGVFFI1517VBJH
released
validated
Json view
File Set
IGVFDS2259DWKL
(single-cell ATAC-seq (SHARE-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-HuIBD01-1-orgs-more-ATAC.barcode.fastq.gz
md5sum
46da9565e75c16a169d881d83901e756
Content MD5sum
08a579fe281616809b1676f7179da7fa
File Size
5.2 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/barcode-file/HuIBD01-1-orgs-more-ATAC.barcode.fastq.gz
Checkfiles Version
v19
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I1
Average Read Length
32
Read Count
299990437
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7625PGWV
InVitroSystem
colon epithelial cell
Homo sapiens colon epithelial cell organoid induced to colon for 7 days
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7971ZCIE
yaml
seqspec
seqspec of IGVFFI9846ECMS, IGVFFI1915BHZZ, IGVFFI1517VBJH
Jason Buenrostro, Broad
1.2 KB
validated