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INDEXED
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SequenceFile
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IGVFFI1515FGYP
IGVFFI1515FGYP
released
validated
Json view
File Set
IGVFDS6762CWMX
(reporter library targeting random selections genome-wide)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P020-R1
md5sum
37504152977fa2faca04b31d1be40d45
Content MD5sum
f8fbf28d63c795334322769d930a02aa
File Size
8.0 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool20.R1.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R1
Average Read Length
301
Read Count
56198406
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0153UJPQ
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
7.7 GB
validated
IGVFFI3279POMC
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
8.1 GB
validated