IGVFFI1512MGNX

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS0289RYKJ(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X015_G6_P014_L002_R2

md5sum

33a6bb1f9c1225bf84b0527504b368c2

Content MD5sum

c9fcf8b58ddc2ec2cfd9901aa75ced03

File Size

9.3 GB

Submitted File Name

Multiome_RNA_X015_G6_L006_P014_S26_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HTHCCDSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

192077700

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM1243ZSOP

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) posterior cingulate gyrus tissue; Homo sapiens (male, 90 or above years) substantia nigra tissue; ... and 10 more samples