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INDEXED
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SequenceFile
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IGVFFI1508GUYJ
IGVFFI1508GUYJ
released
validated
Json view
File Set
IGVFDS1387CFOT
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 2523
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2523_R2
buenrostro-bernstein:SS-LS_2523_R2
md5sum
84854ce0c8776c0dea67593fd8a619d5
Content MD5sum
0246209d226655d4a7ae1a5971556f1f
File Size
937 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-95_L3_SS-PKR-8_SS-V2-PLATE2-3rd-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2523
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
20671167
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4912FPBQ
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 8), male, Homo sapiens (37 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad