{
"@context": "/terms/",
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"File",
"Item"
],
"accession": "IGVFFI1505XVNP",
"aliases": [
"jesse-engreitz:230423pPPIFEnformer-Jurkat-Amp_PPIF_promoter-BioRep1-FFrep1-BinD-PCRrep2_I2"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI1505XVNP](/sequence-files/IGVFFI1505XVNP/) has in progress subobject auxiliary set [IGVFDS9796QHGM](/auxiliary-sets/IGVFDS9796QHGM/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI1505XVNP/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "912e9dee0ef210af110cd5e9e0a0850d",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-13T16:06:32.820172+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS9796QHGM/",
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"gene_list_for": [],
"href": "/sequence-files/IGVFFI1505XVNP/@@download/IGVFFI1505XVNP.fastq.gz",
"illumina_read_type": "I2",
"index": "TTCGCTGA:CAGT",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 4,
"md5sum": "30040f7e0eaf028626990ed765208cd5",
"mean_read_length": 4,
"minimum_read_length": 4,
"read_count": 238311,
"release_timestamp": "2023-12-21T01:18:34.765993+00:00",
"s3_uri": "s3://igvf-files/2023/12/13/f71dc20e-290c-4705-a99f-2219d9f3e47d/IGVFFI1505XVNP.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
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"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
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"summary": "I2 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "f71dc20e-290c-4705-a99f-2219d9f3e47d"
}