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INDEXED
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SequenceFile
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IGVFFI1501GLGI
IGVFFI1501GLGI
released
validated
Json view
File Set
IGVFDS1304DPTZ
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 8275
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8275_R2
md5sum
8efe6ed43c0df8d0fef9f3843ff1f720
Content MD5sum
35803eea499ff85d3c513fafeeb1572e
File Size
8.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2153_L2_SS-PKR-530_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8275
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
139929508
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8703CYDR
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 530)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1891IZCU
yaml
seqspec
seqspec of IGVFFI4385YMJX, IGVFFI1501GLGI
Jason Buenrostro, Broad
1.3 KB
validated