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INDEXED
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SequenceFile
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IGVFFI1478VZJX
IGVFFI1478VZJX
released
validated
Json view
File Set
IGVFDS5192VPKQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 247
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2009_R2
bradley-bernstein:SS-LS_247_R2
buenrostro-bernstein:SS-LS_2009_R2
buenrostro-bernstein:SS-LS_247_R2
md5sum
547fc904ac559c86e6fdaf9c7583953c
Content MD5sum
017fc36b3784663daf23801caf6f885d
File Size
1.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-134_L2_SS-PKR-129_2022-APRIL-R1-PLATE2-ENTIRE-PLATE_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
247
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
21211111
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM3932SXVT
Tissue
brain
Mus musculus C57BL/6 (female) brain tissue (cellular sub pool: SS-PKR 129)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0896MCPD
yaml
seqspec
seqspec of IGVFFI4562ZCKO, IGVFFI1478VZJX
Jason Buenrostro, Broad
1.2 KB
validated