Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI1477YFVT
IGVFFI1477YFVT
released
validated
Json view
File Set
IGVFDS8980IROP
(reporter library targeting random selections genome-wide)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
tim-reddy:starr-seq-dna-fastq-k562-P013-R2
md5sum
0a5059e1ce6efd30219604e076f973be
Content MD5sum
b72428c7b5fb6b07fa63251f65fc158c
File Size
6.6 GB
Submitted File Name
/data/reddylab/Alex/IGVF/data_submissions/raw_data/AIM_1_STARR_seq/K562.starrseq.dna.pool13.R2.fastq.gz
Checkfiles Version
v17
Attribution
Tim Reddy, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NextSeq 2000
Sequencing Run
1
Flowcell ID
AACNYKVM5
Lane
1
Sequencing Kit
NextSeq 2000 P3 XLEAP-SBS Reagent Kit
Illumina Read Type
R2
Average Read Length
301
Read Count
41979783
Files Derived From This File
2 items
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2049ZLGM
bam
alignments
custom assembly unfiltered alignments
Tim Reddy, Duke
6.8 GB
validated
IGVFFI9915DZYL
bam
alignments
GRCh38 unfiltered alignments
Tim Reddy, Duke
6.5 GB
validated