IGVFFI1465CKWV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4214PHWD(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G8_P056_L008_R2

md5sum

5f1a5ffeb206b27ee99be36d4fcb1ddc

Content MD5sum

72bf248fd337c532e510febf54fb0506

File Size

2.9 GB

Submitted File Name

Multiome_RNA_RP005_G8_L008_P056_S79_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

69256564

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5214FLGB

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples