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INDEXED
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SequenceFile
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IGVFFI1459PVBD
IGVFFI1459PVBD
released
validated
Json view
File Set
IGVFDS8130TGNJ
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8317
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8317_R1
md5sum
cf2e6fd45ca909980a0fc84ee5c0251e
Content MD5sum
0e60a4613624ca7b8b4df675350c3140
File Size
7.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2163_L1_SS-PKR-583_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8317
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
183646875
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8298OVYF
Tissue
left cerebral cortex
Mus musculus B6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 583)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4430XESO
yaml
seqspec
seqspec of IGVFFI1459PVBD, IGVFFI1052ETCE
Jason Buenrostro, Broad
1.3 KB
validated