IGVFFI1456LYID

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS3707VRFM(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G3_P062_L007_R1

md5sum

950f6a9d8f4ac5230d7fcb87c58f1bc7

Content MD5sum

f290fa32711aef31c3557f57a3fe015d

File Size

748 MB

Submitted File Name

Multiome_RNA_RP014_G3_L003_P062_S31_L007_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

37886936

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM4901QTFI

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples