Home

IGVFFI1456HVZR

released
validated
File Set
IGVFDS2721AQQO(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 174
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_174_R2
buenrostro-bernstein:SS-LS_174_R2
md5sum
8c7854bde45c89c434665f7518155a5d
Content MD5sum
4664bafb16c51ddb8ab95f6a4da2766a
File Size
9.1 GB
Submitted File Name
gs://fc-7b87fd5f-6af3-4823-befa-ac5875469fa1/BMMC_single_donor_ATAC_L001_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
174
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
213822431

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 212), Homo sapiens

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8305JJZD, IGVFFI1456HVZR
Jason Buenrostro, Broad
1.2 KB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad