IGVFFI1439ITIW

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1905QFFH(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP026_G6_P076_L005_R1

md5sum

6f24a5d082a7c9c02ad2292c4691b07a

Content MD5sum

5ce1129b356a13b04a9f556af28a5102

File Size

16 GB

Submitted File Name

Multiome_RNA_RP026_G6_L006_P076_S46_L005_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

180093283

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5241MOXO

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 79 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 6 more samples