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INDEXED
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SequenceFile
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IGVFFI1417TKPS
IGVFFI1417TKPS
released
validated
Json view
File Set
IGVFDS5549HQMS
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8563
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8563_R1
md5sum
ea20007e3918fcc9bd857581bc700b66
Content MD5sum
39257bd7277249125efd6c6d5c112234
File Size
1.3 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2297_L2_SS-PKR-179_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8563
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
30546513
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0278QWHE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 179)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7955AQDZ
yaml
seqspec
seqspec of IGVFFI1417TKPS, IGVFFI5000BWZM, IGVFFI8721TXFE
Jason Buenrostro, Broad
1.3 KB
validated