IGVFFI1415HRMC

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9761PWQX(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP029_G5_P078_L008_I1

md5sum

fdfd0c2865c0405171508d414d6ddae3

Content MD5sum

da0198de7923b62567048afe5521bf99

File Size

909 MB

Submitted File Name

Multiome_RNA_RP029_G5_L005_P078_S69_L008_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

127321154

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8863JLWX

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples