IGVFFI1412PYBN

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8382VPXR(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP005_G6_P056_L008_I2

md5sum

a41700344d007f441975e8a472c7c680

Content MD5sum

0173411f9210902a304352e0d76e8a88

File Size

440 MB

Submitted File Name

Multiome_RNA_RP005_G6_L006_P056_S77_L008_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JHVLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

69287030

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8050BLFH

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 72 years) posterior cingulate gyrus tissue associated with Parkinson's disease; Homo sapiens (female, 81 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 10 more samples