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IGVFFI1410WPOR

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS1795MXXR(single-nucleus ATAC-seq (10x multiome))
Summary
R3 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_ATAC_X006_G3_P003_L004_R3
md5sum
453b91d560c9e9cf146644c51ab8ca78
Content MD5sum
a3c22bf489186f9443d208974f63157a
File Size
5.8 GB
Submitted File Name
Multiome_ATAC_PD_15-70_SN_X006_S03_L003_B1_T1_P003_S29_L004_R3_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5TH7DSX5
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R3
Average Read Length
50
Read Count
178487232

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
Tissue
Homo sapiens (male, 73 years) substantia nigra tissue associated with Parkinson's disease, cerebral amyloid angiopathy, mild cognitive impairment