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INDEXED
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SequenceFile
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IGVFFI1403DNJE
IGVFFI1403DNJE
released
validated
Json view
File Set
IGVFDS1847PMGO
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1685
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1685_R2
buenrostro-bernstein:SS-LS_1685_R2
md5sum
80098898ff8679520e55e41cc11435d8
Content MD5sum
b737a1788462e294a9ce6b59536eeb37
File Size
20 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1086_L4_SS-PKR-2_SS-V2-PLATE2-3rd-THIRD_R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1685
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
295
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9496THJI
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 2), male, Homo sapiens (37 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad