IGVFFI1384REDL

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9492OFMM(single-nucleus ATAC-seq (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_ATAC_RP020_G3_P065_L008_R2

md5sum

c0a10755d9339bba35309e8910e463d7

Content MD5sum

fa891b8fbb8ac6615860adb2d905fedc

File Size

1.1 GB

Submitted File Name

Multiome_ATAC_RP020_G3_L003_P065_S21_L008_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HC3LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

61988679

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9011XOSL

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 82 years) substantia nigra tissue associated with cerebral amyloid angiopathy; Homo sapiens (male, 84 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples